BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019E06SP1|AL427496
(1006 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1610 710 0.0
>3x_Contig1610
Length = 13981
Score = 710 bits (332), Expect = 0.0
Identities = 352/358 (98%), Gaps = 2/358 (0%)
Strand = Plus / Minus
Query: 650 gcctcgtttccttgatgatgtttttgatgatgttattggcaatgtcattcactacatgcc 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7339 gcctcgtttccttgatgatgtttttgatgatgttattggcaatgtcattcactacatgcc 7280
Query: 710 ctcccgctaatataamagcttcgatctcacgagtaataatgaaccaggagaagtaaaaca 769
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7279 ctcccgctaatataacagcttcgatctcacgagtaataatgaaccaggagaagtaaaaca 7220
Query: 770 ctaatatgccaacaggcagaagtgaaagataacaacagatgaacgaaaatagatcattcg 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7219 ctaatatgccaacaggcagaagtgaaagataacaacagatgaacgaaaatagatcattcg 7160
Query: 830 ggtcatataaaatataagtatcatcaaacgggatctttgaatgaatagcggtcaaattcg 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7159 ggtcatataaaatataagtatcatcaaacgggatctttgaatgaatagcggtcaaattcg 7100
Query: 890 acatgattgccggctagttatgaccgtaatcgtcgatgtttcctaactccytctcttgcg 949
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 7099 acatgattgcc-gctagttatgaccgtaatcgtcgatgtttcctaactccttctcttgcg 7041
Query: 950 tctttgatccgtcgtttagcgttgttatgta-aawttaaaacttttttgtttcattcg 1006
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct: 7040 tctttgatccgtcgtttagcgttgttatgtagaatttaaagcttttttgtttcattcg 6983
Score = 188 bits (88), Expect = 2e-47
Identities = 91/94 (96%)
Strand = Plus / Minus
Query: 1 ggaccattcgaaaataaagtgaacaggattccaattgtgatggattaattaaggtttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7985 ggaccattcgaaaataaagtgaacaggattccaattgtgatggattaattaaggtttata 7926
Query: 61 ttatgttcatataaataggtatwtcawttatwtt 94
|||||||||||||||||||||| ||| |||| ||
Sbjct: 7925 ttatgttcatataaataggtatatcaattatatt 7892
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.48 0.727 1.39
Gapped
Lambda K H
1.48 0.727 1.39
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,988
Number of Sequences: 1807
Number of extensions: 15988
Number of successful extensions: 4637
Number of sequences better than 1.0e-20: 1
length of query: 1006
length of database: 10,358,551
effective HSP length: 15
effective length of query: 991
effective length of database: 10,331,446
effective search space: 10238462986
effective search space used: 10238462986
T: 0
A: 40
X1: 5 (10.7 bits)
X2: 14 (29.9 bits)
S1: 11 (24.0 bits)
S2: 47 (100.9 bits)